vimes provides tools for integrating various types of surveillance data for detecting disease outbreaks. This document provides an overview of the package’s content.
To install the development version from github:
library(devtools)
install_github("reconhub/vimes")
The stable version can be installed from CRAN using:
install.packages("vimes")
Then, to load the package, use:
library("vimes")
vimes is fully documented on a dedicated website.
It also comes with the following vignettes:
demo
: brief overview of the package’s content.distribution
: details of how expected distributions of distances between cases are computedSee details of contributions on:
https://github.com/reconhub/vimes/graphs/contributors
Contributions are welcome via pull requests.
Please note that this project is released with a Contributor Code of Conduct. By participating in this project you agree to abide by its terms.
Maintainer: Thibaut Jombart (thibautjombart@gmail.com)